population – Page 5 – Replicated Typo

Cultural innovation, Pleistocene environments and demographic change

It is well documented that Thomas Robert Malthus’ An Essay on the Principle of Population greatly influenced both Charles Darwin and Alfred Russell Wallace’s independent conception of their theory of natural selection. In it, Malthus puts forward his observation that the finite nature of resources is in conflict with the potentially exponential rate of reproduction, leading to an inevitable struggle between individuals. Darwin took this basic premise and applied it to nature, as he notes in his autobiography:

In October 1838, that is, fifteen months after I had begun my systematic inquiry, I happened to read for amusement Malthus on Population, and being well prepared to appreciate the struggle for existence which everywhere goes on from long-continued observation of the habits of animals and plants, it at once struck me that under these circumstances favourable variations would tend to be preserved, and unfavourable ones to be destroyed. The results of this would be the formation of a new species. Here, then I had at last got a theory by which to work.

The interaction of demographic and evolutionary processes is thus central in understanding Darwin’s big idea: that exponential growth will eventually lead to a large population, and in turn will generate competition for natural selection to act on any heritable variation which conferred a greater fitness advantage. Under these assumptions we are able to interpret the evolutionary record of most species by appealing to two basic causal elements: genes and the environment. As we all know, in most cases the environment generates selection pressures to which genes operate and respond. For humans, however, the situation becomes more complicated when we consider another basic causal element: culture. The current paper by Richerson, Boyd & Bettinger (2009) offers one way to view this muddied situation by delineating the demographic and evolutionary processes through the notion of time scales:

The idea of time scales is used in the physical environmental sciences to simplify problems with complex interactions between processes. If one process happens on a short time scale and the other one on a long time scale, then one can often assume that the short time scale process is at an equilibrium (or in some more complex state that can be described statistically) with respect to factors governed by the long scale process. If the short time scale and long time scale interact, we can often imagine that at each time step in the evolution of the long time scale process, the short time scale process is at “equilibrium.” A separation of time scales, if justified, makes thinking about many problems of coupled dynamics much easier.

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The Movius Line represents the crossing of a demographic threshold

When examining the dispersal of Pleistocene hominins, one of the more fascinating debates concern the patterns of biological and technological evolution in East Asia and other regions of the Old World. One suggestion emerging from palaeoanthropological research places a demarcation between these two regions in the form of a geographical division known as the Movius Line. Specifically, the suggestions that initially led to the Movius Line were based on observations of differing technological patterns, namely: the lack of Acheulean handaxes and the Levallois core traditions in East Asia.

Since Hallam L. Movius’ initial proposal, the recent discovery of handaxes within East Asia have led to suggestions that the Movius Line is in fact obsolete. Suggesting this may not in fact be the case is a recent paper by Stephen Lycett & Christopher Norton, which highlights three central points coming from a growing body of research: 1) “several morphometric analyses have identified statistically significant differences between the attributes of specific biface assemblages from east and west of the Movius Line”; 2) “The number of sites from which handaxes have been recovered in East Asia tend to be geographically sparse compared with many regions west of the Movius Line”; 3) “‘handaxe’ specimens tend only to comprise a small percentage of the total number of artefacts recovered, a situation that contrasts with many classic Acheulean sites in western portions of the Old World, where bifacial handaxes may dominate assemblages in large numbers”.

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Culture and the human genome: a synthesis of genetics and the human sciences

Humans are immersed in culture from birth. It is so fundamental to our experience, and what it means to be human itself, yet we often overlook the consideration that “cultural practices might have transformed the selection pressures acting on humans” (Laland, Odling-Smee & Myles, 2010, pg. 137).

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Cumulative Culture Evolved to Rapidly Coordinate Novel Behaviours

In the deliberations over humanity and its perceived uniqueness, a link is frequently made between our ability to support a rich, diverse culture and the origin of complex human behaviour. Yet what is often overlooked in our view of these two, clearly connected phenomena is the thread that weaves them together: the ability to coordinate behaviour. We need only look at the products of our culture, from language to religion, to see that any variant we may deem successful is contingent on coordinating the behaviour of two or more individuals. Still, what is truly illuminating about this ability is that, far from being a uniquely human feature, the ability to coordinate behaviour is ubiquitous throughout the many organismal kingdoms.

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How Culture Shaped The Human Genome

The study of culture, cultural evolution, gene-culture coevolution and niche construction have all received much more attention over the last decade. So it’s nice to see Nature taking on-board a fascinating review by Kevin Laland, John Odling-Smee and Sean Myles about how culture shaped the human genome: bringing genetics and the human sciences together. It’s really worth reading for anyone interested in the interactions between biology and culture. In particular, I was pleased to see them put forward the notion of culture having accelerated recent evolution, contra Stephen J. Gould’s claim that “there’s been no biological change in humans for 40,000 or 50,000 years”. Here’s the abstract:

Researchers from diverse backgrounds are converging on the view that human evolution has been shaped by gene–culture interactions. Theoretical biologists have used population genetic models to demonstrate that cultural processes can have a profound effect on human evolution, and anthropologists are investigating cultural practices that modify current selection. These findings are supported by recent analyses of human genetic variation, which reveal that hundreds of genes have been subject to recent positive selection, often in response to human activities. Here, we collate these data, highlighting the considerable potential for cross-disciplinary exchange to provide novel insights into how culture has shaped the human genome.

What conclusions can we draw from Neanderthal DNA pt.2

4. Nuclear DNA: Forays into 3 billion base pairs

4.1 Before Vi-80

The Vindija-80 (Vi-80) specimen is an important find for geneticists: it yielded a minimally contaminated sample and provided those first steps into Neanderthal genomics.

Previously, attempts at retrieving ancient nuclear DNA sequences proved to be a notoriously difficult process, plagued with problems of degradation, contamination and chemical damage (Hofreiter et al., 2001). Researchers also need to contend with quantities of nuclear genome available: for every nuclear genome there are approximately several hundred mtDNAs (Green et al., 2008). The severity of these problems, especially contamination, is magnified through Neanderthal genetic similarity with humans (Green et al., 2006). This is troubling because nuclear DNA presents far less variability than mtDNA (Russell, 2002). As a result, huge stretches of nuclear sequences are required to find a significant number of polymorphisms (ibid). Such implications meant that discovering endogenous DNA sequences requires sifting through a large corpus of “[…] more than 70 Neanderthal bone and tooth samples from different sites in Europe and western Asia” (Green et al., 2006, pg. 331).

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What conclusions can we draw from Neanderthal DNA pt.1

In recent times, genetic technology has progressed sufficiently to elucidate upon some of the questions normally preserved for archaeologists. One such question concerns the fate of a group of hominins that roamed Europe and East Asia for at least 250,000 years. During this time, this species adapted and endured some of the harshest environments on offer, all while showing signs of a unique culture. Only for them to suddenly disappear from the fossil record approximately 30,000 years before present (BP) (cf. Barton et al. 2007). So, what happened to our closest evolutionary relatives, the Neanderthals?

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Olfactory communication and mate choice

From the regulation and reproduction in bacteria colonies (Bassler, 2002) to complex smell and taste systems of humans (Van Toller & Dodd, 1988), the ability of sensing chemical stimuli, known as chemosensation, is believed to be the most basic and ubiquitous of senses (Bhutta, 2007). One strain of thought places chemosensation as merely an evolved ability to detect dangerous and volatile substances – such as putrefied food (see Bhutta, 2007). Still, the notion that this ability to detect chemical stimuli, particularly in the domain of smell, serves a purpose in communication is not necessarily a contemporary concept (Wyatt, 2009).

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Iterated Learning and Language Evolution

If we accept that language is not only a conveyer of cultural information, but it is itself a socially learned and culturally transmitted system, then an individual’s linguistic knowledge is the result of observing the linguistic behaviour of others. This well attested process of language acquisition is often termed Iterated Learning, and it opens up a new avenue to investigate the design features of language: that cultural, as opposed to biological, evolution is fundamental in understanding these features.

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Cultaptation Conference

Earlier this year I went along to the Cultaptation Conference at St Andrews. Despite being a fascinating event, there appears to nothing on the blogsphere pertaining to the speakers and their talks. In fact, this generally holds true for cultural evolution: there are no dedicated blogs reporting what is undoubtedly a serious scientific endeavour. As a remedy I’m going to dedicate several future blog posts to the conference. Until then, here are the talk abstracts for some of my personal highlights:

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